Report Type: Expression Report Date: 12:12PM 02/01/2008 ______________________________________________________________________ Filename: 2715 MOE 430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.350 Scale Factor (SF): 4.286 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 42.69 Std: 0.95 Min: 40.20 Max: 45.50 Noise: Avg: 2.30 Std: 0.12 Min: 2.10 Max: 2.70 Corner+ Avg: 149 Count: 32 Corner- Avg: 14930 Count: 32 Central- Avg: 14766 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22857 50.7% Number Absent: 21544 47.8% Number Marginal: 700 1.6% Average Signal (P): 4472.4 Average Signal (A): 90.4 Average Signal (M): 282.0 Average Signal (All): 2314.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 31685.0 P 58381.3 P 71983.8 P 54016.69 2.27 AFFX-GapdhMur/M32599 1985.3 P 8657.8 P 31648.3 P 14097.14 15.94 AFFX-TransRecMur/X57349 113.6 P 47.7 A 125.7 P 95.65 1.11 AFFX-PyruCarbMur/L09192 216.3 A 324.9 A 143.1 A 228.10 0.66 AFFX-18SRNAMur/X00686 59965.7 P 73951.4 P 64537.7 P 66151.59 1.08 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 1114.0 P 2109.5 P 1083.0 P 1435.48 0.97 AFFX-BioC 3679.8 P 4802.3 P 4241.06 1.31 AFFX-BioD 7278.6 P 15665.1 P 11471.82 2.15 AFFX-Cre 48462.8 P 55424.2 P 51943.50 1.14 AFFX-Dap 50.3 P 2.2 A 31.9 A 28.15 0.63 AFFX-Lys 0.9 A 23.9 A 38.6 A 21.15 40.65 AFFX-Phe 3.7 A 3.1 A 176.3 P 61.02 48.15 AFFX-Thr 52.6 A 7.6 A 17.3 A 25.82 0.33 AFFX-Trp 39.2 A 7.8 A 4.6 A 17.21 0.12 AFFX-r2-Ec-bioB 2298.2 P 2029.0 P 1652.5 P 1993.23 0.72 AFFX-r2-Ec-bioC 5231.6 P 6234.4 P 5733.00 1.19 AFFX-r2-Ec-bioD 17055.3 P 23168.5 P 20111.90 1.36 AFFX-r2-P1-cre 53558.7 P 71708.0 P 62633.31 1.34 AFFX-r2-Bs-dap 4.0 A 2.9 A 0.7 A 2.53 0.17 AFFX-r2-Bs-lys 1.1 A 1.6 A 53.3 A 18.65 50.38 AFFX-r2-Bs-phe 1.6 A 1.6 A 7.3 A 3.47 4.65 AFFX-r2-Bs-thr 60.5 P 60.2 A 10.2 A 43.65 0.17 ______________________________________________________________________