Report Type: Expression Report Date: 12:11PM 02/01/2008 ______________________________________________________________________ Filename: 2291 MOE 430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.230 Scale Factor (SF): 6.541 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 65.68 Std: 5.78 Min: 53.20 Max: 84.10 Noise: Avg: 4.64 Std: 0.89 Min: 3.20 Max: 7.90 Corner+ Avg: 200 Count: 32 Corner- Avg: 14107 Count: 32 Central- Avg: 14245 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 20271 44.9% Number Absent: 24136 53.5% Number Marginal: 694 1.5% Average Signal (P): 5254.1 Average Signal (A): 126.1 Average Signal (M): 422.7 Average Signal (All): 2435.5 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 6263.9 P 22842.6 P 48683.3 P 25929.94 7.77 AFFX-GapdhMur/M32599 839.4 P 4705.2 P 17236.1 P 7593.57 20.53 AFFX-TransRecMur/X57349 774.1 P 110.8 A 705.4 P 530.14 0.91 AFFX-PyruCarbMur/L09192 108.6 A 500.6 A 656.8 P 422.02 6.04 AFFX-18SRNAMur/X00686 44518.4 P 100987.8 P 59470.9 P 68325.70 1.34 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2195.6 P 3893.8 P 2214.0 P 2767.79 1.01 AFFX-BioC 7227.2 P 9158.4 P 8192.80 1.27 AFFX-BioD 14297.9 P 25417.3 P 19857.60 1.78 AFFX-Cre 76590.5 P 93025.4 P 84807.94 1.21 AFFX-Dap 121.4 P 64.9 A 26.5 A 70.94 0.22 AFFX-Lys 5.0 A 12.0 A 113.1 P 43.36 22.80 AFFX-Phe 4.4 A 7.2 A 186.7 A 66.12 42.00 AFFX-Thr 60.8 A 48.5 A 18.7 A 42.64 0.31 AFFX-Trp 77.8 A 16.0 A 5.0 A 32.92 0.06 AFFX-r2-Ec-bioB 3906.8 P 3637.4 P 3517.6 P 3687.28 0.90 AFFX-r2-Ec-bioC 10300.1 P 11506.0 P 10903.03 1.12 AFFX-r2-Ec-bioD 32226.0 P 40313.3 P 36269.63 1.25 AFFX-r2-P1-cre 86739.7 P 113364.5 P 100052.07 1.31 AFFX-r2-Bs-dap 7.6 A 64.2 A 41.9 A 37.93 5.48 AFFX-r2-Bs-lys 57.5 A 52.6 A 127.1 P 79.07 2.21 AFFX-r2-Bs-phe 7.0 A 8.2 A 99.8 A 38.34 14.27 AFFX-r2-Bs-thr 96.2 A 33.3 A 15.9 A 48.47 0.17 ______________________________________________________________________