Report Type: Expression Report Date: 12:11PM 02/01/2008 ______________________________________________________________________ Filename: 1848 MOE 430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 2.200 Scale Factor (SF): 6.467 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 59.02 Std: 3.34 Min: 53.20 Max: 69.70 Noise: Avg: 3.68 Std: 0.56 Min: 2.90 Max: 5.40 Corner+ Avg: 217 Count: 32 Corner- Avg: 17903 Count: 32 Central- Avg: 16986 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 19091 42.3% Number Absent: 25322 56.1% Number Marginal: 688 1.5% Average Signal (P): 5766.8 Average Signal (A): 123.5 Average Signal (M): 502.9 Average Signal (All): 2518.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 10612.9 P 44378.7 P 79504.2 P 44831.90 7.49 AFFX-GapdhMur/M32599 706.3 P 5142.9 P 24508.6 P 10119.25 34.70 AFFX-TransRecMur/X57349 113.3 A 103.6 P 180.5 P 132.47 1.59 AFFX-PyruCarbMur/L09192 153.3 A 349.1 A 127.2 A 209.85 0.83 AFFX-18SRNAMur/X00686 40126.0 P 103824.1 P 54965.9 P 66305.32 1.37 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2890.5 P 4701.6 P 3210.1 P 3600.74 1.11 AFFX-BioC 9614.0 P 11908.9 P 10761.43 1.24 AFFX-BioD 19434.8 P 32183.6 P 25809.20 1.66 AFFX-Cre 87228.6 P 102459.6 P 94844.08 1.17 AFFX-Dap 74.6 A 80.3 A 11.1 A 55.36 0.15 AFFX-Lys 74.6 A 39.2 A 65.8 A 59.85 0.88 AFFX-Phe 4.5 A 4.6 A 220.4 A 76.50 49.11 AFFX-Thr 49.3 A 40.8 A 10.3 A 33.49 0.21 AFFX-Trp 125.5 A 6.8 A 12.0 A 48.10 0.10 AFFX-r2-Ec-bioB 5317.6 P 5487.0 P 4793.3 P 5199.27 0.90 AFFX-r2-Ec-bioC 12876.5 P 13824.3 P 13350.43 1.07 AFFX-r2-Ec-bioD 42421.7 P 48835.3 P 45628.54 1.15 AFFX-r2-P1-cre 92183.1 P 121717.5 P 106950.33 1.32 AFFX-r2-Bs-dap 32.9 A 2.8 A 30.3 A 22.00 0.92 AFFX-r2-Bs-lys 6.2 A 12.1 A 59.6 A 25.94 9.62 AFFX-r2-Bs-phe 5.1 A 7.8 A 123.1 P 45.31 24.16 AFFX-r2-Bs-thr 78.0 A 165.0 A 35.7 A 92.92 0.46 ______________________________________________________________________