Report Type: Expression Report Date: 01:27PM 05/16/2008 ______________________________________________________________________ Filename: Urothelium 8 MOE 430.2.CHP Probe Array Type: Mouse430_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.110 Scale Factor (SF): 5.257 TGT Value: 1500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 37.63 Std: 0.27 Min: 36.30 Max: 38.10 Noise: Avg: 1.75 Std: 0.05 Min: 1.60 Max: 1.90 Corner+ Avg: 145 Count: 32 Corner- Avg: 14839 Count: 32 Central- Avg: 13821 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 45101 Number Present: 22842 50.6% Number Absent: 21574 47.8% Number Marginal: 685 1.5% Average Signal (P): 4233.5 Average Signal (A): 85.7 Average Signal (M): 275.3 Average Signal (All): 2189.3 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-b-ActinMur/M12481 18380.7 P 42747.8 P 42121.0 P 34416.49 2.29 AFFX-GapdhMur/M32599 2294.4 P 9393.7 P 22410.3 P 11366.12 9.77 AFFX-TransRecMur/X57349 697.2 P 675.7 P 1185.8 P 852.89 1.70 AFFX-PyruCarbMur/L09192 253.7 A 527.3 P 459.1 P 413.35 1.81 AFFX-18SRNAMur/X00686 25404.3 P 75384.3 P 53136.5 P 51308.38 2.09 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 2252.2 P 4114.9 P 2288.1 P 2885.07 1.02 AFFX-BioC 6183.8 P 8367.2 P 7275.53 1.35 AFFX-BioD 12608.1 P 20536.8 P 16572.45 1.63 AFFX-Cre 56337.2 P 63491.3 P 59914.23 1.13 AFFX-Dap 32.0 A 4.4 A 6.5 A 14.31 0.20 AFFX-Lys 11.3 A 24.5 A 23.6 A 19.79 2.09 AFFX-Phe 4.5 A 4.7 A 110.9 P 40.03 24.67 AFFX-Thr 31.2 A 11.1 A 7.9 A 16.70 0.25 AFFX-Trp 47.7 A 5.6 A 11.9 A 21.73 0.25 AFFX-r2-Ec-bioB 3945.9 P 3928.7 P 3387.3 P 3753.98 0.86 AFFX-r2-Ec-bioC 7866.4 P 9280.4 P 8573.39 1.18 AFFX-r2-Ec-bioD 26037.4 P 32313.6 P 29175.50 1.24 AFFX-r2-P1-cre 57269.2 P 78306.8 P 67787.99 1.37 AFFX-r2-Bs-dap 7.4 A 2.3 A 18.7 A 9.47 2.53 AFFX-r2-Bs-lys 1.2 A 50.6 A 19.5 A 23.78 16.74 AFFX-r2-Bs-phe 3.7 A 1.7 A 117.2 M 40.87 31.55 AFFX-r2-Bs-thr 54.2 P 15.2 A 10.7 A 26.70 0.20 ______________________________________________________________________